Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCGGGAAGCGCGCTCGTTCGGGATCGCCGAGGGGGCTGAGATAGTGA
(((((.(((((((((.(((...&.))).))))))..))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152837
GeneSymbolSNX16
Binding site21,71
Score1.0
Seed0
Au0.5
Energy-18.8
Binding len23
Me-6.072
Phylopstem0.4893512272727272
Phylopflank0.63872489
Longest consecutive pairings6
Position of longest consecutive pairings12
Pairings in 3prime end4
Position5UTR
2D Structure