Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTAGATGGAAGAGGATCCTATCCGAAGCTAGG
..((((((((((((((((((((&)))))))))).....)))))...........))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152841
GeneSymbolHPS4
Binding site3848,3885
Score1.0
Seed1
Au0.559
Energy-23.1
Binding len37
Me-4.957
Phylopstem2.7861437583333335
Phylopflank1.9335478481249995
Longest consecutive pairings10
Position of longest consecutive pairings27
Pairings in 3prime end8
Position3UTR
2D Structure