Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAAGGCAGTGTGCAGGA
....((((((((((((((...&))))))))....)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_152841
GeneSymbolHPS4
Binding site4505,4524
Score0.846
Seed0
Au0.426
Energy-26.7
Binding len19
Me-9.547
Phylopstem-0.38219651111111097
Phylopflank-0.014641492499999992
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure