Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCTGCTCCAGGGAGCACCAGCTGCAGCTGA
...((((((((((((..((((&)))).................)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152841
GeneSymbolHPS4
Binding site3742,3776
Score0.846
Seed0
Au0.397
Energy-22.6
Binding len34
Me-6.748
Phylopstem-0.7196370416666668
Phylopflank1.0002855387499998
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure