Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTGCAAGACAGGCTCAGCCATACTCTTACTATCATGCAGCCAGGG
.((((((...((.((((((((.&)))))))).............................))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_152850
GeneSymbolPIGO
Binding site2128,2176
Score0.846
Seed1
Au0.5
Energy-15.2
Binding len48
Me-9.695
Phylopstem3.9148293749999996
Phylopflank2.1675302162500003
Longest consecutive pairings8
Position of longest consecutive pairings40
Pairings in 3prime end7
Position3UTR
2D Structure