Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGACATTGACTTCAGCAAAAGCACGGGGCTGTAAA
((((((((.(((((((.((((&)))).)))...............)).)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152851
GeneSymbolMS4A6A
Binding site1190,1228
Score0.923
Seed1
Au0.588
Energy-19.5
Binding len38
Me-4.994
Phylopstem-0.05607868750000001
Phylopflank0.14415387000000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure