Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGACATTGACTTCAGCAAAAGCACGGGGCTGTAAA
((((((((.(((((((.((((&)))).)))...............)).)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152852
GeneSymbolMS4A6A
Binding site1419,1457
Score0.846
Seed1
Au0.588
Energy-19.5
Binding len38
Me-4.994
Phylopstem0.326097
Phylopflank0.19366842000000004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure