Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCAGTGCAGGAGAGACAGTGAGGCTGCACCCACCCAGGAGTGTGGCCACGTGG
((((((((.((((((((((...&.))))))))).).))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152854
GeneSymbolCD40
Binding site779,834
Score1.0
Seed1
Au0.353
Energy-24.5
Binding len23
Me-4.994
Phylopstem2.398612909090909
Phylopflank1.0410845962500004
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end5
Position3UTR
2D Structure