Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCCCAGGCTGTCGTCTCGTCGAGGAGCCCCTCCCTCAGGTGC
((((((((((((((((((((((&)))))))..))).............)))))))).........)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152864
GeneSymbolNKAIN4
Binding site944,991
Score0.923
Seed1
Au0.279
Energy-23.5
Binding len47
Me-3.938
Phylopstem3.7757224456521725
Phylopflank4.0694262325
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end8
Position3UTR
2D Structure