Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGTGCCACGGCTGGCTGCAGC
((((((((((.((.(((..((&))..))).)).)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152864
GeneSymbolNKAIN4
Binding site807,830
Score0.821
Seed1
Au0.412
Energy-20.1
Binding len23
Me-7.619
Phylopstem6.667181818181818
Phylopflank6.554610999999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure