Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAACCAGGGAGACTGCAC
.(((((((.(((((((.....&))))))..).)).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152866
GeneSymbolMS4A1
Binding site1602,1621
Score0.846
Seed1
Au0.603
Energy-17.0
Binding len19
Me-4.85
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings13
Pairings in 3prime end3
Position3UTR
2D Structure