Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGGGGTCGGGCTCCGGCTGCGGCTGCTGCTGCGGC
..(((((((((((((...(((&.))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152881
GeneSymbolPTK7
Binding site39,78
Score1.0
Seed1
Au0.176
Energy-24.4
Binding len19
Me-5.19
Phylopstem0.3889820769230769
Phylopflank0.2339174819117647
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure