Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCATGGGGGAGCCAGG
..(((((((((((.((((....&)))).))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152888
GeneSymbolCOL22A1
Binding site5040,5057
Score0.846
Seed1
Au0.25
Energy-26.7
Binding len17
Me-5.814
Phylopstem5.149629659090909
Phylopflank4.72851161
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure