Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGTGGGAAGCCAGA
..(((((((((..((((((...&)))))).)))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152888
GeneSymbolCOL22A1
Binding site5429,5447
Score0.923
Seed1
Au0.515
Energy-25.3
Binding len18
Me-9.593
Phylopstem4.91431214
Phylopflank2.8409862337500007
Longest consecutive pairings6
Position of longest consecutive pairings12
Pairings in 3prime end5
Position3UTR
2D Structure