Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGGCTGGGGAGGAGGCCT
....(((((((((((((.((..&)).))))))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001348910
GeneSymbolSLC35A5
Binding site3433,3451
Score1.0
Seed0
Au0.441
Energy-19.8
Binding len18
Me-9.547
Phylopstem0.03736242857142857
Phylopflank-0.02121899999999994
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end5
Position3UTR
2D Structure