Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTTGGCCAGGTA
(((((((..(((..........&)))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_152890
GeneSymbolCOL24A1
Binding site5549,5562
Score1.0
Seed1
Au0.544
Energy-16.9
Binding len13
Me-10.422
Phylopstem-0.2873223714285715
Phylopflank0.47271667375
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure