Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGGCAGCCAGTCCACGGTGGCAGTGGTGGTCCTGGCGCGGCTGCAAT
((((((((((((((((..(((&)))...))))))............................)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152892
GeneSymbolLRWD1
Binding site1691,1742
Score0.923
Seed1
Au0.353
Energy-25.5
Binding len51
Me-3.938
Phylopstem1.717496834090909
Phylopflank2.7769680500000007
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure