Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCGCGGCAGCTGCAGG
((((((((((.(.(((.(((.&))).)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152897
GeneSymbolSNX21
Binding site450,470
Score0.923
Seed1
Au0.368
Energy-25.6
Binding len20
Me-8.051
Phylopstem3.5031406600000006
Phylopflank1.9288268112499996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure