Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGGCACCCCAGCGGCTGCT
..(((((((((((..((((((&))))))..)))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152897
GeneSymbolSNX21
Binding site493,516
Score0.923
Seed1
Au0.412
Energy-24.5
Binding len23
Me-6.549
Phylopstem2.3717015714285714
Phylopflank3.334464389999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure