Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTCCTGAGCAGCTGGGAT
((.((((((((((((..((((&)))))))))......))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152897
GeneSymbolSNX21
Binding site765,791
Score0.846
Seed0
Au0.382
Energy-22.1
Binding len26
Me-5.728
Phylopstem0.00976526111111113
Phylopflank-0.21745428874999995
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
Position3UTR
2D Structure