Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCAACTGCTGCCTTTGTTGCTTATACTGCCCGGCTGGAC
.(.(((((((((((((.(((.&))).)))))))).......................))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152908
GeneSymbolSLC47A2
Binding site1465,1508
Score0.923
Seed0
Au0.456
Energy-19.6
Binding len43
Me-5.351
Phylopstem1.2058436194444444
Phylopflank0.8538969849999999
Longest consecutive pairings8
Position of longest consecutive pairings31
Pairings in 3prime end6
PositionCDS
2D Structure