Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTGCCATGTTGGCCAGGC
.((((((..(((..(((((...&)))))..)))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_152909
GeneSymbolZNF548
Binding site3891,3910
Score0.846
Seed1
Au0.559
Energy-18.7
Binding len19
Me-9.309
Phylopstem-0.042693166666666664
Phylopflank0.013439312499999967
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure