Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATGTGGCCAGGTTTGCAGCCCAGGCTGCAC
.(((((((..(((((((((((&.)))....))))))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_152925
GeneSymbolCPNE1
Binding site1327,1360
Score0.923
Seed1
Au0.441
Energy-24.3
Binding len26
Me-6.092
Phylopstem4.131925666666667
Phylopflank3.32665736125
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end8
PositionCDS
2D Structure