Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTGCAGTGCCAGC
..(((((((....(((((((((&)))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_152990
GeneSymbolPXT1
Binding site1304,1321
Score0.923
Seed1
Au0.456
Energy-19.0
Binding len17
Me-13.66
Phylopstem0.9698303333333332
Phylopflank0.6116327662499998
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure