Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGCCAGGATGAAGCCAC
...(((((.(.((((((.(((.&))).)))))).).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_152994
GeneSymbolPPP1R21
Binding site2064,2083
Score0.923
Seed0
Au0.471
Energy-20.9
Binding len19
Me-10.396
Phylopstem2.5950731666666664
Phylopflank1.183015885
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure