Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCACTTGAATGCCAGA
..(((((((.(((((((.....&)))).))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_153000
GeneSymbolAPCDD1
Binding site1981,1998
Score0.846
Seed1
Au0.603
Energy-16.5
Binding len17
Me-6.2
Phylopstem3.7286237499999997
Phylopflank0.5493022762500002
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure