Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCTGGGAGGTGGAGCTTGCAGTGA
(((((((((((((((((((...&)))))))))..)))))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153000
GeneSymbolAPCDD1
Binding site3473,3498
Score0.846
Seed1
Au0.397
Energy-23.2
Binding len25
Me-3.938
Phylopstem-0.12437979166666667
Phylopflank-0.3270988037499999
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end5
Position3UTR
2D Structure