Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAGCCGAGCCTACCGGAGCAGCATGCGC
.((((((((((((((.(((((&))))))))))............))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153021
GeneSymbolPLB1
Binding site2890,2923
Score0.846
Seed1
Au0.324
Energy-22.6
Binding len33
Me-4.026
Phylopstem1.277874922222222
Phylopflank1.6332014274999997
Longest consecutive pairings10
Position of longest consecutive pairings23
Pairings in 3prime end7
PositionCDS
2D Structure