Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCACCCTACCTCAGTGCAT
.((((.(((.(((((((((((&))))))))....))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153021
GeneSymbolPLB1
Binding site2224,2248
Score0.846
Seed0
Au0.426
Energy-21.2
Binding len24
Me-6.937
Phylopstem0.3684808333333333
Phylopflank1.8960894725000002
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end8
PositionCDS
2D Structure