Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTGTGGCCTGACGTCCCTGTGCTTCCGCTGCTGCT
..(((((.((((..((((((.&.))).)))..)))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153022
GeneSymbolTMEM52B
Binding site666,704
Score0.923
Seed0
Au0.397
Energy-24.4
Binding len21
Me-9.417
Phylopstem2.0251447428571425
Phylopflank2.069747644375
Longest consecutive pairings5
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure