Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCCGCCTGCTGCAGC
(((((((.(((((....((((&)))))))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153023
GeneSymbolSPATA13
Binding site1512,1531
Score0.923
Seed1
Au0.471
Energy-22.5
Binding len19
Me-8.077
Phylopstem5.432209714285714
Phylopflank4.4043354075
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end4
PositionCDS
2D Structure