Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGCCAGCCGCAGTTTGTCTATTCCTGAAGACTCGGTTGCTGCAGA
(((((((((((((((...(((&)))...))))))))..........................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153023
GeneSymbolSPATA13
Binding site344,392
Score0.923
Seed1
Au0.426
Energy-22.3
Binding len48
Me-4.171
Phylopstem2.5916674292682935
Phylopflank1.9314284575000005
Longest consecutive pairings8
Position of longest consecutive pairings34
Pairings in 3prime end5
Position5UTR
2D Structure