Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGAATTGTAAGCCGTTTGTTACGCTGCAGTGCTAGATTTGCCAGGG
.(((((((((((.(((((....&.))))).)).))....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_153026
GeneSymbolPRICKLE1
Binding site3500,3547
Score0.923
Seed1
Au0.559
Energy-18.1
Binding len24
Me-5.082
Phylopstem3.8651241874999998
Phylopflank2.5654222624999994
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure