Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGTGCAGCCGAGTTGCGT
.(((((((.((((((((..((&))..))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153026
GeneSymbolPRICKLE1
Binding site248,268
Score0.923
Seed1
Au0.324
Energy-22.3
Binding len20
Me-4.85
Phylopstem0.228139875
Phylopflank0.06000808749999994
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure