Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCTCGCGGCGCGGCTGCAGC
((((((((((.(((((.((.(&).)).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153042
GeneSymbolKDM1B
Binding site49,70
Score0.846
Seed1
Au0.176
Energy-23.1
Binding len21
Me-6.762
Phylopstem0.57464332
Phylopflank0.726487901
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure