Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTCTGGTGAGCGGCTGCAC
.(((((((((....(..((((&))))..)......))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153046
GeneSymbolTDRD9
Binding site3165,3188
Score0.923
Seed1
Au0.368
Energy-20.7
Binding len23
Me-12.344
Phylopstem1.0886642111111111
Phylopflank2.3839036350000002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure