Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGAGGGAGGATTTTACTGCAAGTCAGCATCAAAGCACCGGTGT
((((((((((.((((((((...&))))))))))))............................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153047
GeneSymbolFYN
Binding site2417,2464
Score0.846
Seed1
Au0.559
Energy-23.9
Binding len47
Me-6.762
Phylopstem5.782098894736844
Phylopflank5.758814886250002
Longest consecutive pairings12
Position of longest consecutive pairings35
Pairings in 3prime end5
Position3UTR
2D Structure