Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACATGGCAGCACAGGTGGCTGCAGG
((((((((((((((((...((&))...))))).)..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153048
GeneSymbolFYN
Binding site993,1018
Score0.846
Seed1
Au0.515
Energy-19.2
Binding len25
Me-3.938
Phylopstem5.009964736842105
Phylopflank3.810737125000001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure