Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTATGCAGCTGCTGTGGCAAACCGAGCCAAAGGAGGAGGCTGCGAA
((((((((((((((((((((.&))).))))))))).........................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153050
GeneSymbolMTMR3
Binding site1278,1325
Score0.846
Seed1
Au0.456
Energy-24.3
Binding len47
Me-3.938
Phylopstem5.535205343478262
Phylopflank4.6264433175000015
Longest consecutive pairings9
Position of longest consecutive pairings34
Pairings in 3prime end7
PositionCDS
2D Structure