Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTATGCAGCTGCTGTGGCAAACCGAGCCAAAGGAGGAGGCTGCGAA
((((((((((((((((((((.&))).))))))))).........................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153051
GeneSymbolMTMR3
Binding site1278,1325
Score0.846
Seed1
Au0.456
Energy-24.3
Binding len47
Me-3.938
Phylopstem5.764589778260871
Phylopflank4.982264760000001
Longest consecutive pairings9
Position of longest consecutive pairings34
Pairings in 3prime end7
PositionCDS
2D Structure