Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGCATACCCCGGCAGCTGCT
..((((((((((((((..(((&))).))).)))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153182
GeneSymbolRIOX2
Binding site951,974
Score0.821
Seed1
Au0.412
Energy-22.8
Binding len23
Me-4.957
Phylopstem0.45817090555555556
Phylopflank0.26079821000000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure