Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCTCACCACAGCTGGAGA
((.((((((.(((.(((((..&)))))..))).)))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153182
GeneSymbolRIOX2
Binding site3092,3113
Score0.897
Seed0
Au0.603
Energy-21.5
Binding len21
Me-7.594
Phylopstem2.2893399999999997
Phylopflank0.9892754599999997
Longest consecutive pairings6
Position of longest consecutive pairings4
Pairings in 3prime end5
Position3UTR
2D Structure