Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGCGGGCGAGGCCTTCCTTGGCCAGTGC
(((((((((((((((((((...&))))).))..))))........)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153187
GeneSymbolSLC22A1
Binding site354,385
Score1.0
Seed1
Au0.309
Energy-21.8
Binding len31
Me-3.938
Phylopstem2.06014479
Phylopflank1.7803562562499997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure