Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTAGCAGAAATGCCAGA
..(((((...((((((((((((&))))))))).)))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153188
GeneSymbolTNPO1
Binding site6849,6871
Score1.0
Seed0
Au0.706
Energy-22.3
Binding len22
Me-9.57
Phylopstem0.7220264
Phylopflank0.6509557337499998
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end8
Position3UTR
2D Structure