Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGACGAGCAAGGGCTTCAGCAAATCCTGCAGCTGTT
..((((((((((((((.((((&)))).))))...................)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153188
GeneSymbolTNPO1
Binding site139,178
Score0.846
Seed1
Au0.426
Energy-21.1
Binding len39
Me-4.957
Phylopstem4.857251666666667
Phylopflank3.51285163625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure