Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTGTATGTCAGGTA
(((((((((((((.........&))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001330498
GeneSymbolHMBOX1
Binding site1776,1790
Score1.0
Seed1
Au0.603
Energy-19.6
Binding len14
Me-5.763
Phylopstem4.040398461538461
Phylopflank4.1015876250000005
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure