Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTACGGCCGCCCAGGCCAAATCCAAGCAGGCTATCTTAGCGGCAC
.(((.((((((((((((.(((&))).)))))))))...........................))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153200
GeneSymbolEDF1
Binding site96,144
Score0.923
Seed0
Au0.426
Energy-21.2
Binding len48
Me-7.912
Phylopstem-0.7481768461538462
Phylopflank-0.9572470762499998
Longest consecutive pairings9
Position of longest consecutive pairings35
Pairings in 3prime end7
PositionCDS
2D Structure