Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGGAGACAGAGGAGCTGCAC
.(((((((.(..((((..(((&))).....)))).).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153200
GeneSymbolEDF1
Binding site234,257
Score0.923
Seed1
Au0.368
Energy-17.9
Binding len23
Me-11.021
Phylopstem4.977384142857142
Phylopflank2.3983418237499996
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure