Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTTCCTTCGTTATTGGAGCCAGG
..((((((((.....(((.((.&)).)))........)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153201
GeneSymbolHSPA8
Binding site38,61
Score0.846
Seed1
Au0.471
Energy-19.5
Binding len23
Me-14.01
Phylopstem2.031840625
Phylopflank2.226151615
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure