Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTAGAATTATTAATGAGCCAACTGCTGCTGCT
..(((((.(((((((......&.))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153201
GeneSymbolHSPA8
Binding site585,618
Score1.0
Seed0
Au0.618
Energy-20.8
Binding len15
Me-7.504
Phylopstem3.942643285714286
Phylopflank5.4911134399999995
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end2
PositionCDS
2D Structure